imagedata
1.5.1
Contents:
User Guide
Developer Documentation
imagedata
Index
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Index
A
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B
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C
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D
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E
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F
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G
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H
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I
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M
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N
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O
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R
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S
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T
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U
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V
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W
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X
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Z
A
AbstractArchive (class in imagedata.archives.abstractarchive)
AbstractPlugin (class in imagedata.formats.abstractplugin)
AbstractTransport (class in imagedata.transports.abstracttransport)
add_geometry() (imagedata.header.Header method)
add_localfile() (imagedata.archives.abstractarchive.AbstractArchive method)
(imagedata.archives.filesystemarchive.FilesystemArchive method)
(imagedata.archives.zipfilearchive.ZipfileArchive method)
add_template() (imagedata.header.Header method)
AssociationFailed
AssociationNotEstablished
authors (imagedata.archives.abstractarchive.AbstractArchive property)
(imagedata.formats.abstractplugin.AbstractPlugin property)
(imagedata.transports.abstracttransport.AbstractTransport property)
B
basename() (imagedata.archives.abstractarchive.AbstractArchive method)
(imagedata.archives.filesystemarchive.FilesystemArchive method)
(imagedata.archives.zipfilearchive.ZipfileArchive method)
C
close() (imagedata.archives.abstractarchive.AbstractArchive method)
(imagedata.archives.filesystemarchive.FilesystemArchive method)
(imagedata.archives.zipfilearchive.WriteFileIO method)
(imagedata.archives.zipfilearchive.ZipfileArchive method)
(imagedata.transports.abstracttransport.AbstractTransport method)
(imagedata.transports.dicomtransport.DicomTransport method)
(imagedata.transports.filetransport.FileTransport method)
(imagedata.transports.xnattransport.XnatTransport method)
CommaSepAction (class in imagedata.cmdline)
compare_axes() (in module tests.compare_headers)
compare_geometry_headers() (in module tests.compare_headers)
compare_headers() (in module tests.compare_headers)
compare_optional() (in module tests.compare_headers)
compare_template_headers() (in module tests.compare_headers)
create_affine() (imagedata.formats.dicomplugin.DICOMPlugin method)
create_affine_xyz() (imagedata.formats.niftiplugin.NiftiPlugin method)
D
deepcopy_DicomHeaderDict() (in module imagedata.header)
DependencyError
,
[1]
description (imagedata.archives.abstractarchive.AbstractArchive property)
(imagedata.formats.abstractplugin.AbstractPlugin property)
(imagedata.transports.abstracttransport.AbstractTransport property)
DICOMPlugin (class in imagedata.formats.dicomplugin)
DicomTransport (class in imagedata.transports.dicomtransport)
DictAction (class in imagedata.cmdline)
DtypeAction (class in imagedata.cmdline)
E
extractDicomAttributes() (imagedata.formats.dicomplugin.DICOMPlugin method)
F
FilesGivenForMultipleURLs
,
[1]
FilesystemArchive (class in imagedata.archives.filesystemarchive)
FileTransport (class in imagedata.transports.filetransport)
find_axis() (imagedata.header.Header method)
G
get_dicom_files() (imagedata.formats.dicomplugin.DICOMPlugin method)
get_image_from_numpy() (imagedata.formats.itkplugin.ITKPlugin method)
getDicomAttribute() (imagedata.formats.dicomplugin.DICOMPlugin method)
getmembers() (imagedata.archives.abstractarchive.AbstractArchive method)
(imagedata.archives.filesystemarchive.FilesystemArchive method)
(imagedata.archives.zipfilearchive.ZipfileArchive method)
getnames() (imagedata.archives.abstractarchive.AbstractArchive method)
(imagedata.archives.filesystemarchive.FilesystemArchive method)
(imagedata.archives.zipfilearchive.ZipfileArchive method)
getOriginForSlice() (imagedata.formats.dicomplugin.DICOMPlugin method)
getPositionForVoxel() (imagedata.formats.abstractplugin.AbstractPlugin method)
getTimeline() (imagedata.formats.abstractplugin.AbstractPlugin method)
getVoxelForPosition() (imagedata.formats.abstractplugin.AbstractPlugin method)
H
Header (class in imagedata.header)
I
imagedata.archives.abstractarchive
module
imagedata.archives.filesystemarchive
module
imagedata.archives.zipfilearchive
module
imagedata.axis
module
imagedata.cmdline
module
imagedata.formats.abstractplugin
module
imagedata.formats.dicomplugin
module
imagedata.formats.itkplugin
module
imagedata.formats.matplugin
module
imagedata.formats.niftiplugin
module
imagedata.header
module
imagedata.readdata
module
imagedata.transports.abstracttransport
module
imagedata.transports.dicomtransport
module
imagedata.transports.filetransport
module
imagedata.transports.xnattransport
module
ImageTypeError
,
[1]
info() (imagedata.transports.abstracttransport.AbstractTransport method)
(imagedata.transports.dicomtransport.DicomTransport method)
(imagedata.transports.filetransport.FileTransport method)
(imagedata.transports.xnattransport.XnatTransport method)
InputOrderAction (class in imagedata.cmdline)
is_file() (imagedata.archives.abstractarchive.AbstractArchive method)
(imagedata.archives.filesystemarchive.FilesystemArchive method)
(imagedata.archives.zipfilearchive.ZipfileArchive method)
isfile() (imagedata.transports.abstracttransport.AbstractTransport method)
(imagedata.transports.dicomtransport.DicomTransport method)
(imagedata.transports.filetransport.FileTransport method)
(imagedata.transports.xnattransport.XnatTransport method)
ITKPlugin (class in imagedata.formats.itkplugin)
M
MatPlugin (class in imagedata.formats.matplugin)
MatrixDimensionNotImplemented
Member (class in imagedata.archives.abstractarchive)
mimetypes (imagedata.archives.abstractarchive.AbstractArchive property)
module
imagedata.archives.abstractarchive
imagedata.archives.filesystemarchive
imagedata.archives.zipfilearchive
imagedata.axis
imagedata.cmdline
imagedata.formats.abstractplugin
imagedata.formats.dicomplugin
imagedata.formats.itkplugin
imagedata.formats.matplugin
imagedata.formats.niftiplugin
imagedata.header
imagedata.readdata
imagedata.transports.abstracttransport
imagedata.transports.dicomtransport
imagedata.transports.filetransport
imagedata.transports.xnattransport
tests
tests.compare_headers
tests.context
tests.test_archive_file
tests.test_archive_zip
tests.test_axis
tests.test_transport_filetransport
tests.test_version
MultipleVariablesInMatlabFile
N
name (imagedata.archives.abstractarchive.AbstractArchive property)
(imagedata.formats.abstractplugin.AbstractPlugin property)
(imagedata.transports.abstracttransport.AbstractTransport property)
new_uid() (imagedata.header.Header method)
NiftiPlugin (class in imagedata.formats.niftiplugin)
NoArchiveError
NoDICOMAttributes
NoInputFile
NoOtherInstance
,
[1]
,
[2]
NoSuchFile
NoTransportError
O
open() (imagedata.archives.abstractarchive.AbstractArchive method)
(imagedata.archives.filesystemarchive.FilesystemArchive method)
(imagedata.archives.zipfilearchive.ZipfileArchive method)
(imagedata.transports.abstracttransport.AbstractTransport method)
(imagedata.transports.dicomtransport.DicomTransport method)
(imagedata.transports.filetransport.FileTransport method)
(imagedata.transports.xnattransport.XnatTransport method)
OutputFormatAction (class in imagedata.cmdline)
R
read() (imagedata.formats.abstractplugin.AbstractPlugin method)
(imagedata.formats.dicomplugin.DICOMPlugin method)
(in module imagedata.readdata)
read_files() (imagedata.formats.dicomplugin.DICOMPlugin method)
ReadOnlyError
removePrivateTags() (imagedata.formats.dicomplugin.DICOMPlugin method)
replace_geometry_attributes() (imagedata.formats.abstractplugin.AbstractPlugin static method)
S
schemes (imagedata.transports.abstracttransport.AbstractTransport property)
set_default_values() (imagedata.header.Header method)
setDicomAttribute() (imagedata.formats.dicomplugin.DICOMPlugin method)
setUp() (tests.test_archive_file.TestArchiveFile method)
(tests.test_archive_zip.TestArchiveZip method)
(tests.test_transport_filetransport.TestFiletransport method)
sort_images() (imagedata.formats.dicomplugin.DICOMPlugin method)
sorted_plugins_dicom_first() (in module imagedata.readdata)
SortOnAction (class in imagedata.cmdline)
store() (imagedata.transports.dicomtransport.DicomTransport method)
str_to_dtype() (in module imagedata.readdata)
T
test_isfile() (tests.test_transport_filetransport.TestFiletransport method)
test_mimetype() (tests.test_archive_file.TestArchiveFile method)
(tests.test_archive_zip.TestArchiveZip method)
test_new_archive() (tests.test_archive_file.TestArchiveFile method)
(tests.test_archive_zip.TestArchiveZip method)
test_open_file() (tests.test_transport_filetransport.TestFiletransport method)
test_open_new() (tests.test_transport_filetransport.TestFiletransport method)
test_open_nonexist() (tests.test_transport_filetransport.TestFiletransport method)
test_open_nonexist_dir() (tests.test_transport_filetransport.TestFiletransport method)
test_read_one_file() (tests.test_archive_file.TestArchiveFile method)
test_readfile() (tests.test_transport_filetransport.TestFiletransport method)
test_uniform_axis() (tests.test_axis.TestAxis method)
test_uniform_length_axis() (tests.test_axis.TestAxis method)
test_uniform_length_axis_step2() (tests.test_axis.TestAxis method)
test_unknown_mimetype() (tests.test_archive_file.TestArchiveFile method)
(tests.test_archive_zip.TestArchiveZip method)
test_unknown_url() (tests.test_archive_file.TestArchiveFile method)
(tests.test_archive_zip.TestArchiveZip method)
test_variable_axis() (tests.test_axis.TestAxis method)
test_variable_axis2() (tests.test_axis.TestAxis method)
test_variable_axis_rgb() (tests.test_axis.TestAxis method)
test_version() (tests.test_version.TestVersion method)
test_walk() (tests.test_transport_filetransport.TestFiletransport method)
test_write_then_read() (tests.test_transport_filetransport.TestFiletransport method)
TestArchiveFile (class in tests.test_archive_file)
TestArchiveZip (class in tests.test_archive_zip)
TestAxis (class in tests.test_axis)
TestFiletransport (class in tests.test_transport_filetransport)
tests
module
tests.compare_headers
module
tests.context
module
tests.test_archive_file
module
tests.test_archive_zip
module
tests.test_axis
module
tests.test_transport_filetransport
module
tests.test_version
module
TestVersion (class in tests.test_version)
to_localfile() (imagedata.archives.abstractarchive.AbstractArchive method)
(imagedata.archives.filesystemarchive.FilesystemArchive method)
(imagedata.archives.zipfilearchive.ZipfileArchive method)
transport (imagedata.archives.abstractarchive.AbstractArchive property)
(imagedata.archives.filesystemarchive.FilesystemArchive property)
(imagedata.archives.zipfilearchive.ZipfileArchive property)
U
UnevenSlicesError
UniformAxis (class in imagedata.axis)
UniformLengthAxis (class in imagedata.axis)
UnknownOptionType
UnknownTag
url (imagedata.archives.abstractarchive.AbstractArchive property)
(imagedata.formats.abstractplugin.AbstractPlugin property)
(imagedata.formats.niftiplugin.NiftiPlugin attribute)
(imagedata.transports.abstracttransport.AbstractTransport property)
use_query() (imagedata.archives.abstractarchive.AbstractArchive method)
(imagedata.archives.filesystemarchive.FilesystemArchive method)
(imagedata.archives.zipfilearchive.ZipfileArchive method)
V
ValueErrorWrapperPrecisionError
VariableAxis (class in imagedata.axis)
version (imagedata.archives.abstractarchive.AbstractArchive property)
(imagedata.formats.abstractplugin.AbstractPlugin property)
(imagedata.transports.abstracttransport.AbstractTransport property)
W
walk() (imagedata.transports.abstracttransport.AbstractTransport method)
(imagedata.transports.dicomtransport.DicomTransport method)
(imagedata.transports.filetransport.FileTransport method)
(imagedata.transports.xnattransport.XnatTransport method)
write() (in module imagedata.readdata)
write_3d_numpy() (imagedata.formats.abstractplugin.AbstractPlugin method)
(imagedata.formats.dicomplugin.DICOMPlugin method)
(imagedata.formats.itkplugin.ITKPlugin method)
(imagedata.formats.matplugin.MatPlugin method)
(imagedata.formats.niftiplugin.NiftiPlugin method)
write_4d_numpy() (imagedata.formats.abstractplugin.AbstractPlugin method)
(imagedata.formats.dicomplugin.DICOMPlugin method)
(imagedata.formats.itkplugin.ITKPlugin method)
(imagedata.formats.matplugin.MatPlugin method)
(imagedata.formats.niftiplugin.NiftiPlugin method)
write_enhanced() (imagedata.formats.dicomplugin.DICOMPlugin method)
write_numpy_itk() (imagedata.formats.itkplugin.ITKPlugin method)
write_numpy_nifti() (imagedata.formats.niftiplugin.NiftiPlugin static method)
write_slice() (imagedata.formats.dicomplugin.DICOMPlugin method)
writedata() (imagedata.archives.abstractarchive.AbstractArchive method)
(imagedata.archives.filesystemarchive.FilesystemArchive method)
(imagedata.archives.zipfilearchive.ZipfileArchive method)
WriteFileIO (class in imagedata.archives.zipfilearchive)
WriteMultipleArchives
WriteOnFile
X
XnatTransport (class in imagedata.transports.xnattransport)
Z
ZipfileArchive (class in imagedata.archives.zipfilearchive)
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v: 1.5.1
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