imagedata
3.4.1
Contents:
User Guide
Installation
Tutorial
Collections
Jupyter Notebook
Working with Colors
Motivation and goals
Design
Series Class
Input/output
Sorting
DICOM Attributes
Console Applications
Examples
Plugin Architecture
API Reference
Developer Documentation
imagedata
User Guide
Edit on GitHub
User Guide
Installation
Tutorial
Reading data
Displaying data
Saving data
Add DICOM template to other image formats
Add DICOM template to numpy array
Sorting DICOM files into multiple Series
Collections
Introduction
Reading a Study of Multiple Series
Study Attributes
GeneralEquipment Attributes
Reading a Patient with Multiple Study Instances
Patient Attributes
ClinicalTrialSubject Attributes
Reading a Cohort of Multiple Patient Instances
Cohort Attributes
Jupyter Notebook
Showing image series
Drawing a mask
Working with Colors
Color Data Type
Creating Color Series
Saving and Loading Color Series
Fuse Series and Mask
When to blend the original series
Motivation and goals
Design
Series Class
Input/output
Local files
ZIP file
XNAT
DICOM
Sorting
DICOM Attributes
Series properties
Full access to DICOM attributes
Console Applications
Included console applications
dicom_dump
image_calculator
image_data
image_list
image_show
image_statistics
timeline
Write your own console applications
Examples
Split MRI diffusion series into separate series for each b value
Segment an image, display fused image with segmented ROI in red
Draw a time curve when mask is moved
Motion correction using FSL MCFLIRT
Plugin Architecture
Image format plugins
Archive plugins
Transport plugins
API Reference
Series Class
Series
Collections Class
Study
Patient
Cohort
Viewer Class
Viewer
Imagedata packages
Module Axis
Module cmdline
Module imagedata.header
Module imagedata.readdata
Formats API Reference
Module imagedata.formats.abstractplugin
Module imagedata.formats.dicomplugin
Module imagedata.formats.itkplugin
Module imagedata.formats.matplugin
Module imagedata.formats.niftiplugin
Archives API Reference
Module imagedata.archives.abstractarchive
Module imagedata.archives.filesystemarchive
Module imagedata.archives.zipfilearchive
Transports API Reference
Module imagedata.transports.abstracttransport
Module imagedata.transports.dicomtransport
Module imagedata.transports.filetransport
Module imagedata.transports.xnattransport
Apps API Reference
Apps Diffusion API Reference
Read the Docs
v: 3.4.1
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